prt-get: installing /usr/ports/j_v/python3-numpy prt-get: starting build Tue Feb 27 00:12:34 2018 =======> Building '/home/pkgmk/packages/python3-numpy#1.13.3-1.pkg.tar.xz'. bsdtar -p -o -C /home/pkgmk/work/python3-numpy/src -xf /home/pkgmk/distfiles/numpy-1.13.3.tar.gz + build + cd numpy-1.13.3 + /usr/bin/python3 setup.py install --root=/home/pkgmk/work/python3-numpy/pkg Note: if you need reliable uninstall behavior, then install with pip instead of using `setup.py install`: - `pip install .` (from a git repo or downloaded source release) - `pip install numpy` (last NumPy release on PyPi) blas_opt_info: blas_mkl_info: libraries mkl_rt not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE blis_info: libraries blis not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE openblas_info: libraries openblas not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS libraries tatlas not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE atlas_3_10_blas_info: libraries satlas not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE atlas_blas_info: libraries f77blas,cblas,atlas not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE blas_info: customize UnixCCompiler C compiler: gcc -pthread -DNDEBUG -Wall -Wstrict-prototypes -Wno-unused-result -Wsign-compare -fwrapv -O2 -march=x86-64 -pipe -fPIC creating /tmp/tmpo2u3pikf/tmp creating /tmp/tmpo2u3pikf/tmp/tmpo2u3pikf compile options: '-I/usr/include -c' gcc: /tmp/tmpo2u3pikf/source.c FOUND: libraries = ['blas', 'blas'] library_dirs = ['/usr/lib64'] include_dirs = ['/usr/include'] FOUND: define_macros = [('NO_ATLAS_INFO', 1)] libraries = ['blas', 'blas'] library_dirs = ['/usr/lib64'] include_dirs = ['/usr/include'] /bin/sh: 1: svnversion: not found /bin/sh: 1: svnversion: not found non-existing path in 'numpy/distutils': 'site.cfg' F2PY Version 2 lapack_opt_info: lapack_mkl_info: libraries mkl_rt not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE openblas_lapack_info: libraries openblas not found in ['/usr/lib64', '/usr/lib', '/usr/lib/'] NOT AVAILABLE atlas_3_10_threads_info: Setting PTATLAS=ATLAS libraries tatlas,tatlas not found in /usr/lib64 libraries lapack_atlas not found in /usr/lib64 libraries tatlas,tatlas not found in /usr/lib libraries lapack_atlas not found in /usr/lib libraries tatlas,tatlas not found in /usr/lib/ libraries lapack_atlas not found in /usr/lib/ NOT AVAILABLE atlas_3_10_info: libraries satlas,satlas not found in /usr/lib64 libraries lapack_atlas not found in /usr/lib64 libraries satlas,satlas not found in /usr/lib libraries lapack_atlas not found in /usr/lib libraries satlas,satlas not found in /usr/lib/ libraries lapack_atlas not found in /usr/lib/ NOT AVAILABLE atlas_threads_info: Setting PTATLAS=ATLAS libraries ptf77blas,ptcblas,atlas not found in /usr/lib64 libraries lapack_atlas not found in /usr/lib64 libraries ptf77blas,ptcblas,atlas not found in /usr/lib libraries lapack_atlas not found in /usr/lib libraries ptf77blas,ptcblas,atlas not found in /usr/lib/ libraries lapack_atlas not found in /usr/lib/ NOT AVAILABLE atlas_info: libraries f77blas,cblas,atlas not found in /usr/lib64 libraries lapack_atlas not found in /usr/lib64 libraries f77blas,cblas,atlas not found in /usr/lib libraries lapack_atlas not found in /usr/lib libraries f77blas,cblas,atlas not found in /usr/lib/ libraries lapack_atlas not found in /usr/lib/ NOT AVAILABLE lapack_info: FOUND: libraries = ['lapack', 'lapack'] library_dirs = ['/usr/lib64'] language = f77 FOUND: define_macros = [('NO_ATLAS_INFO', 1)] libraries = ['lapack', 'lapack', 'blas', 'blas'] library_dirs = ['/usr/lib64'] language = f77 include_dirs = ['/usr/include'] running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building py_modules sources creating build creating build/src.linux-x86_64-3.6 creating build/src.linux-x86_64-3.6/numpy creating build/src.linux-x86_64-3.6/numpy/distutils building library "npymath" sources customize Gnu95FCompiler Found executable /usr/bin/gfortran customize IntelFCompiler Could not locate executable ifort Could not locate executable ifc customize LaheyFCompiler Could not locate executable lf95 customize PGroupFCompiler Could not locate executable pgfortran customize AbsoftFCompiler Found executable /usr/bin/f90 Could not locate executable f77 absoft: no Fortran 77 compiler found absoft: no Fortran 77 compiler found customize NAGFCompiler Found executable /usr/bin/f95 customize VastFCompiler customize CompaqFCompiler Could not locate executable fort customize IntelItaniumFCompiler Could not locate executable efort Could not locate executable efc customize IntelEM64TFCompiler customize GnuFCompiler Found executable /usr/bin/g77 gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found customize G95FCompiler Could not locate executable g95 customize PathScaleFCompiler Could not locate executable pathf95 don't know how to compile Fortran code on platform 'posix' C compiler: gcc -pthread -DNDEBUG -Wall -Wstrict-prototypes -Wno-unused-result -Wsign-compare -fwrapv -O2 -march=x86-64 -pipe -fPIC compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python3.6m -c' gcc: _configtest.c failure. removing: _configtest.c _configtest.o Running from numpy source directory. /home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/system_info.py:572: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() /usr/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'define_macros' warnings.warn(msg) Traceback (most recent call last): File "setup.py", line 392, in setup_package() File "setup.py", line 384, in setup_package setup(**metadata) File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/core.py", line 169, in setup return old_setup(**new_attr) File "/usr/lib/python3.6/site-packages/setuptools/__init__.py", line 129, in setup return distutils.core.setup(**attrs) File "/usr/lib/python3.6/distutils/core.py", line 148, in setup dist.run_commands() File "/usr/lib/python3.6/distutils/dist.py", line 955, in run_commands self.run_command(cmd) File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/install.py", line 62, in run r = self.setuptools_run() File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/install.py", line 36, in setuptools_run return distutils_install.run(self) File "/usr/lib/python3.6/distutils/command/install.py", line 545, in run self.run_command('build') File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/build.py", line 47, in run old_build.run(self) File "/usr/lib/python3.6/distutils/command/build.py", line 135, in run self.run_command(cmd_name) File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/build_src.py", line 148, in run self.build_sources() File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/build_src.py", line 159, in build_sources self.build_library_sources(*libname_info) File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/build_src.py", line 294, in build_library_sources sources = self.generate_sources(sources, (lib_name, build_info)) File "/home/pkgmk/work/python3-numpy/src/numpy-1.13.3/numpy/distutils/command/build_src.py", line 377, in generate_sources source = func(extension, build_dir) File "numpy/core/setup.py", line 674, in get_mathlib_info raise RuntimeError("Broken toolchain: cannot link a simple C program") RuntimeError: Broken toolchain: cannot link a simple C program =======> ERROR: Building '/home/pkgmk/packages/python3-numpy#1.13.3-1.pkg.tar.xz' failed.